Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENNTEVTEFILVGLTDDPELQIPLFIVFLFIYLITLVGNLGMIELILLDSCLHTPMYFFLSNLSLVDFGYSSAVTP---KVMVGFLTGDKFILYNACATQFFFFVAFITAES-FLLASMAYDRYAALCKPLHYTTTMTTN-------VCACL--AIG-SYICGFLNASIHTGNTFRLSFCRSNVVEHFFCDAPPLLTLSCSDNYISEMVIFFVVGFNDLFSILVILISYLFIFIT----IMKMRS-PEGRQKAFSTCASHLTA---VSIFYG-----------TGIFMYLRPNSSHFMGTDKMASVFYAIVI----PMLNPLVYSLRNKEVKSAFKKTVGKAKASIGFIF |
| 4UHR Chain:A ((12-303)) | ---------------------------VELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSAAAADILVGVLAIPFAIAISTGFCAACHGCLFIAC------FVLVLTASSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNCGQPKEGKA---GCGEGQVACLFEDVVPM-------NYMVYFNFFACV----LVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDC-H----APLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQQEPF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UHR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207435 for 1786 contacts (-116.1/contact) +
2D Compatibility (PS) -25613 + (NN) -8936 + (LL) 3384
1D Compatibility (HY) -27600 + (ID) 3850
Total energy: -270050.0 ( -151.20 by residue)
QMean score : 0.290
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