Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSANATLKPLCPILEQMSRLQSHSNTSIRYIDHAAVLLHGLASLLGLVENGVILFVV--GCRMRQTVVTTWVLHLALSDLLASASLPFFTYFLAVGHSWELGTTFCKLHSSIFFLNMFASGFLLSAISLDRCLQVVRPVWAQNHRTVAAAHKVCLVLWALAVLNTVPYFVFRDTISRLDGRIMCYYNVLLLNPGPDRDATCNSRQVALAVSKFLLAFLVPLAIIASSHAAVSLRLQH----RGRRRPGRFVRLVAAVVAAFAL----CWGPYHVFSLLEARAHANPGLRPLVWRG---LPFVTSLAFFNSVANPVLYVLTCPDMLRKLRRSLRTVLESVLVDDSELGGAGSSRRRRTSSTARSASPLALCSRPEEPRGPARLLGWLLGSCAASPQTGPLNRALSSTSS |
| 4EA3 Chain:A ((139-393)) | ---------------------------------------------GLLGNCLVMYVILRHTKMK-TATNIYIFNLALADTLVLLTLPFQGTDILLGF-WPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHP-------TSSKAQAVNVAIWALASVVGVPVAIM-GSAQVEDEEIECLVEI----PTPQ-----DYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLSGSREKDRNLRRITRLVLVVVAVFVGCWTPVQVFVLAQGL-----GVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDENFKACFR------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4EA3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -182741 for 1687 contacts (-108.3/contact) +
2D Compatibility (PS) -24596 + (NN) -12783 + (LL) 9584
1D Compatibility (HY) -23600 + (ID) 3850
Total energy: -237986.0 ( -141.07 by residue)
QMean score : 0.268
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