Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTTFIPIIFSSVVVVLFVIGNFANGFIALVNSIERVKRQKISFADQILTALAVSRVGLLWVLLLNWYSTVFNPAFYSVEVRTTAYNVWAVTGHFSNWLATSLSIFYLLKIANFSNLIFLHLKRRVKSVILVMLLGPLLFLACQLFVINMKEIVRTKEYEGNLTWKIKLRSAVYLSDATVTTLGNLVPFTLTLLCFLLLICSLCKHLKKMQLHG-KGSQDPST---KVHI-KALQTVIFFLLLCAVYFLSIMISVWSFGSLENKPVFMFCKAIRFSYPS--IHPFILIWGNKKLKQTFLSVLRQVRYWVKGEKPSSP |
| 3VGA Chain:A ((187-308)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LVPLLLMLGVYLRIFLAARRQLKQMESQPLPGERARSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRS--HVL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VGA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55379 for 594 contacts (-93.2/contact) +
2D Compatibility (PS) -12001 + (NN) -8248 + (LL) 17676
1D Compatibility (HY) -12000 + (ID) 1500
Total energy: -71452.0 ( -120.29 by residue)
QMean score : 0.257
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