Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLESHLIIYFLLAVIQFLLGIFTNGIIVVVNGIDLIKHRKMAPLDLLLSCLAVSRIFLQLFIFYVNVIV-IFFIE-FIMCSANCAILLFINELELWLATWLGVFYCAKVASVRHPLFIWLKMRISKLVPWMILGSLLYVSMICVFHS-KYAGFMVPYFLRKFFSQNAT----IQ-KEDT-LAIQ-I-FSFVAEFSVPLLIFLFAVLLLIFSLGRHTRQMRNTVAG-----------------------------------------------------------------------------------------------------------------------------------------------------SRVPGRGAPISALLSILSFLILYFSHCMIKVFL-SSLKF-----HIRRFIFLFFILVIGIYPSGHSLILILGNPKLKQNAKKFLLHSKCCQ |
3EML Chain:A ((22-469)) | ------SVYITVELAIAVLAILGNVLVCWAVWLNS---NLQNVTNYFVVSLAAADIAVGVLAIPFAITISTGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIR---IPLRYN-GLVTGTRAKGIIAICWVLSFAIGLTPMLGWN----N-CGQ---SQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQTFRKIIRSHVLRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EML.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -248206 for 2041 contacts (-121.6/contact) +
2D Compatibility (PS) -27989 + (NN) -11469 + (LL) 2212
1D Compatibility (HY) -14800 + (ID) 1850
Total energy: -302102.0 ( -148.02 by residue)
QMean score : 0.237
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