Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MFSPADNIFIILITGEFILGILGNGYIALVNWIDWIKKKKISTV-DYILTNLVIARICLISVMVVNGIVIVLNPDVYTKNKQQIVIFTFWTFANYLNMWITTCLNVFYFLKIASSSHPLFL--WLKWKIDMVVHWILLGCFAISLLVSLIAAIVLSCDYRFHAIAKHKRNITEMFHVSK-------IPYFEPLTLFNLFAIVPFIVSLISFFLLVRSLW-RHTKQIKL----YATGSRDPSTEVHVRAIKTMTSFIFFFFLYYISSILMTFSYLMTKYKLAVEFGEIAAILYPLGHSLILIVLNNKLRQTFVRMLTCRKIACMI |
| 4S0V Chain:A ((71-277)) | ----------------FVVALIGNVLVCVAVW----KNHHMRTVTNYFIVNLSLADVLVTITCLPATLVVDITETWFFGQSLCKVIPYLQTVSVSVSVLTLSCIALDRWYAIC---HP---STAKRARNSIVIIWI------VSCIIMIPQAIVMECSTVF---------KTTLFTVCDERWGGEIYPKMYHICFFLVTYMAPLCLMVLAYLQIFRKLWCRQGIDCSFWNESYLTGSRDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARSLEEKHGNVKVITEMLSR |
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General information:
TITO was launched using:
| RESULT:
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Template: 4S0V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134753 for 1155 contacts (-116.7/contact) +
2D Compatibility (PS) -18256 + (NN) -3217 + (LL) 3396
1D Compatibility (HY) -22000 + (ID) 2200
Total energy: -177030.0 ( -153.27 by residue)
QMean score : 0.259
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