Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLKLVIIENMAEIMLFSLDLLLFSTDILCFNFPSKMIKLPGFITIQIFFYPQASFGISANTILLLFHIFTFVFSHRSKSIDMIISHLSLIHILLLFTQAILVSLDFF--GSQNTQDDLRYKVIVFLNKVMRGLSICTPCLLSVLQAIIS-PS-IFSLAKLKHPSASHILGFFLFSWVLNMFIGVIFCCTLRLPPVKRGQSSVCHTALFLFAHELH-PQETVFHTNDFEGCHLYRVHGPLKRLHGDYFIQTIR-GYLSAF---TQ--------------------------------------------------------------------------------------------------------------------------------------------------------PACPRVSPVKRASQAIL-LLVSFVFTYWVDFTFSFSGGVTWI--NDSLLVWLQVIVANSYAAISPLMLIYADNQIFKTLQMLWFKYLSPPKLMLKFNRQCGSTKK |
| 3PBL Chain:A ((41-472)) | --------------------------------------------YALSYCALILAIVFGNGLVCMAVLKE---RALQTTTNYLVVSLAVADLLVATLV-MPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHG-TGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTTG----------------DPTVCSISNPDFVIYSSVVSFYL----PFGVTVLVYARIYVVLKQRRRKNIFEMLRIDEGLRLKIYKDTEGYYTIGIGHLLTKSPSLNAAKSELDKAIGRNTNGVITKDEAEKLFNQDVDAAVRGILRNAKLKPVYDSLDAVRRAALINMVFQMGETGVAGFTNSLRMLQQKRWDEAAVNLAKSRWYNQTPNRAKRVITTFRTGTWDAYGVPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIEFRKAFLKILSC-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PBL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -210026 for 2015 contacts (-104.2/contact) +
2D Compatibility (PS) -27363 + (NN) -7690 + (LL) 7484
1D Compatibility (HY) -10400 + (ID) 1500
Total energy: -249495.0 ( -123.82 by residue)
QMean score : 0.269
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