Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSYKFLKEVLHRLKNIENTLKVLDQSQLNVEDKVEQMGLLEEIRHEIISHNIIKESLAEAGTPSNKKKGDSWQLKLIERMHKSNSAIPIDLVKSLSKVKIECQNLRRLSQSEPSSLEKLKERFADLVKLIRGVVSIKSQQLKCSKYDSLLADYDSDITEKDVKEIFPKLGKFFSDNIDRIIEK-QKKDKITNTQKIATQKQIELGSLCLQQIGVT--------SHHTF--------YHHPIDYDESDFCYGLFLLLRYSGHEIYQR----CLAQNSISSSFTRYIMCETQGLFMERMIGTSREFIEFIQPYIKEKLTIKGKVNAKINSVENLYLIFNKVNLSSPLKKADEFSLLANIMLRTKLEQDIINGTLEVKDLHDAWLEGMEHYKIPVKAKNELDTYFQDEYWVSGTMGYFPIKIIALIIAVQIFSFIKKNHYEFLGAIIKGDFGLLIGWLSQNV--CSAKCGFLDLLKKVTGKGLDVECCSSYLSEKYDLSQ |
| 3HQ2 Chain:A ((154-495)) | --------------------------------------------------------------------------------------------------------------------------------------------------YDALLDLFEPGVTVKVLDQLFAELKEAIIPLVKQVTASGNKPDTSFITKAFPKEKQKELSLYFLQELGYDFDGGRLDETVHPFATTLNRGDVRVTTRYDEKDFRTAIFGTIHECGHAIYEQNIDEALSGTNLSDGASMGIH-ESQSLFYENFIGRNKHFW---TPYYK-KIQEASPVQFKDISLDDFVRAINESKPSFIRVEADELTYPLHIIIRYEIEKAIFSNEVSVEDLPSLWNQKYQDY-LGITPQTDAEGILQDVHWAGGDFGYFPSYALGYMYAAQLKQKMLEDLPEFDALLERGEFHPIKQWLTEKVHIHGKRKKPLDIIKDATGEELNVRYLIDYLSNKYSNLY |
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General information:
TITO was launched using:
| RESULT:
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Template: 3HQ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -205872 for 2600 contacts (-79.2/contact) +
2D Compatibility (PS) -33663 + (NN) -9374 + (LL) 12400
1D Compatibility (HY) -20400 + (ID) 4550
Total energy: -261459.0 ( -100.56 by residue)
QMean score : 0.504
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