Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MILQSEVMSKDEGVKTEESNEFTGGIYFCSTEGSGLIDDDYSNIGEVSTEKNGALEEQLGDMSQELELEHVCKMFP
4REQ Chain:B ((387-441))
-----------EEVNIGRVNDPAGGSYYVESLTRSLADAAWKEFQEV---------EKLGGMSKAVMTEHVTKVLD
General information:
TITO was launched using:
RESULT:
Template:
4REQ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 2117 for 242 contacts (8.7/contact) +
2D Compatibility (PS) -5520 + (NN) 3354 + (LL) 1508
1D Compatibility (HY) -3600 + (ID) 950
Total energy: -3091.0 ( -12.77 by residue)
QMean score : -0.016
(partial model without unconserved sides chains):
PDB file :
Tito_4REQ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4REQ-query.scw
PDB file :
Tito_Scwrl_4REQ.pdb
: