Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIEQFLNNLILASSSERRIALLKQINIEPGLILPADIDEIPLRKELPKDYSIRMAKSKAEKIQSSN---------PDYFVLGIDTVVACGRRILLKAKNIEQAEKYIRLLSGRRHRVYTSVCLLTPDRSKQHIRTVV------TIVKFKRLSEREIKYYLASEEWKNRAGGCNMQGLAGMFVLFLRGSYSSIIGLPLHETYCLLSNYFNLNLY
2P5X Chain:A ((6-196))
--------VVLASASPRRQEILSNAGLR-FEVVPSKFKEKLDKASFATPYGYAMETAKQKALEVANRLYQKDLRAPD-VVIGADTIVTVGGLILEKPVDKQDAYRMLSRLSGREHSVFTGVAIVHCSSKDHQLDTRVSEFYEETKVKFSELSEELLWEYVHSGEPMDKAGGYGIQALGGMLVESVHGDFLNVVGFPLNH-FCKQLVKLYY---
General information:
TITO was launched using:
RESULT:
Template:
2P5X.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -97229 for 1368 contacts (-71.1/contact) +
2D Compatibility (PS) -19451 + (NN) -6331 + (LL) 1112
1D Compatibility (HY) -14400 + (ID) 2900
Total energy: -139199.0 ( -101.75 by residue)
QMean score : 0.502
(partial model without unconserved sides chains):
PDB file :
Tito_2P5X.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2P5X-query.scw
PDB file :
Tito_Scwrl_2P5X.pdb
: