Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSTSLIVGLAFFVGFIFSYKLLKKVIKNALNDKRNKSKLTNEEIEKFRRDMLEYYKKSSEKYKKLDEEVNKMMNEAFDKADSIIKHNRKQLDRTLDDNARSYLEKVTDQVEKAIGDLQANTANIAADAVKKIMQEHKDDKRSSEVISSFSRNLNKKLH |
4WW0 Chain:A ((403-455)) | ---------------------------------------------------------SPDLLREIDEEVRRIITEQYEKAKAIVEEYKEPLKAVV----KKLLEKETITCEEFVEVFKLYGIELKDKCKK---------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4WW0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1782 for 217 contacts (8.2/contact) +
2D Compatibility (PS) -5750 + (NN) -2965 + (LL) 6544
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -6339.0 ( -29.21 by residue)
QMean score : 0.356
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