Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLKLYDMQKNYAPLLANLGLIYMKKENYKGAKEYMVTVISLDQNNIFYIYNLAVILDKLSDFKNAAIFYLKLLNMAANLKDVSKKIPICKVEARLKFIKLHSTD
3FP3 Chain:A ((301-367))
--KAVDLNPEYPPTYYHRGQMYFILQDYKNAKEDFQKAQSLNPENVYPYIQLACLLYKQGKFTESEAFFNETKLKFPTLPEVPTFFAEILTDRGDFDTAIKQYD
General information:
TITO was launched using:
RESULT:
Template:
3FP3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40024 for 444 contacts (-90.1/contact) +
2D Compatibility (PS) -6976 + (NN) -3274 + (LL) 384
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -54890.0 ( -123.63 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_3FP3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FP3-query.scw
PDB file :
Tito_Scwrl_3FP3.pdb
: