Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MYNIKLYYSSYLRYNIRSSLYIPFKPNILVKLDILKNEVLSLKTVSPEKVVEVSNLIDKFRLKILTDFQNFEKQWFQEFKNTWKQKLMPNMRSEYLGLHCTKIY
4CI2 Chain:B ((106-156))
---------------------IPVLPHVMVML--IPGQTLPLQLFHPQEVSMVRNLIQKDRTFAVLAYSNVRER------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4CI2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -1183 for 240 contacts (-4.9/contact) +
2D Compatibility (PS) -5315 + (NN) -1116 + (LL) 4232
1D Compatibility (HY) -4800 + (ID) 800
Total energy: -8982.0 ( -37.42 by residue)
QMean score : 0.247
(partial model without unconserved sides chains):
PDB file :
Tito_4CI2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CI2-query.scw
PDB file :
Tito_Scwrl_4CI2.pdb
: