Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMAHIKEASDTNFSEMYGSLFPSKENGKGTWIDWKAAFKQQKLLEAESNVMLL-EISYSLLKENQLYKEEVGTKLDNIIKNNQGNVRKGRQIC
1JH5 Chain:A ((15-63))
---------------------PTIQKGSYTFVPWLLSFKRGSALEEKENKILVKETGYFFIYGQVLYTDKTYAMGHLIQRKKVHVFGDELSLV
General information:
TITO was launched using:
RESULT:
Template:
1JH5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 3980 for 173 contacts (23.0/contact) +
2D Compatibility (PS) -4841 + (NN) 777 + (LL) 1604
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -3180.0 ( -18.38 by residue)
QMean score : -0.046
(partial model without unconserved sides chains):
PDB file :
Tito_1JH5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JH5-query.scw
PDB file :
Tito_Scwrl_1JH5.pdb
: