Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFAVIETGGKQYLVKKGSVIKVEKLEAEEGKEVEIDKAVCLSGNGLSYLTDA---TVKAEVLEQCRGEKIIIFKKKRRKNYRRKTGHRQYITVLRINEINLQK
2ZJP Chain:O ((5-95))
----IQTGGKQYRVSEGDVIRVESLQGEAGDKVEL-KALFVGGEQTVFGEDAGKYTVQAEVVEHGRGKKIYIRKYKSGVQYRRRTGHRQNFTAIKILGI----
General information:
TITO was launched using:
RESULT:
Template:
2ZJP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 7892 for 471 contacts (16.8/contact) +
2D Compatibility (PS) -8772 + (NN) 5643 + (LL) 748
1D Compatibility (HY) -6400 + (ID) 2300
Total energy: -3189.0 ( -6.77 by residue)
QMean score : 0.186
(partial model without unconserved sides chains):
PDB file :
Tito_2ZJP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZJP-query.scw
PDB file :
Tito_Scwrl_2ZJP.pdb
: