Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKRYIDSKKENRVDFILRNHGMSVIIMAVIMFLPPVAISVLYFFDIYDQHTNIEINLLVSTLVTLFIVYNVKHYRYLLNIIEFQNAIFANALNHNTEFCLILHKNEDVVYADARFYERFKDYIDNDVTLGKILEVGDISEKDKKALYQALKNNSSVQVRIVLSKKSRISSFLLLCEPIPDNPQIAINSNKILNLSLAPIARPHGYFVLKATQMNKEQVYEELIEKHNIGTYIANTKGIILSVNKRFLDMFELKKLEKGSSINDFIFQSKYNNVATDNNILFFTVNGVPFKAYMSTAMFCDKHHHSYIYGLITPVESNVIDYQLHPCFANSSIAIAQCDVNGSFIKKNTALIKLAGPDNSSIFTLISDDYHMKIREYFLSNRINNASFDVQLNNNDNMKIYFNKFLHNRMMFILCYFVDNTEHKNLEIKLEHYQKMQAIGQLAGGIAHDFNNILTGIIGFCDLLLLQHSAGDPSFGDIIQIQQNAKRGSN----LVKQLLAFSRRQTMQPKIIDVNSTIANLCEMIKRLIGENIKFTTYYGRDL-------GMVRA--DQGQLEQVILNLAVNASAAMEKGGELTIRTFNKKIDSLNSTPQGMFSPDKEAI----EHGNYVMIEVIDTGCGMVSDTVEKVFDPFFSTKDITSGTGLGLSTVYGIIKQTEGYIYVASEVNCGTKFSIFLPMVYISDENHREKGSEEIEKPVVNEVKDNGIILLIEDEDSVREFITKALKRKGFDVIEASMGSKALEIISKKNQHIDLIITDVIMPEVSGPEIVKEALIHRPDINVIFISGYTEDAFLKNDNINIEDFHFLPKPFTLSELGNKVQSVLHKAKKAV |
4JAU Chain:A ((7-247)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SKELE-RLKRIDRMKT--EFIANISHELRTPLTVIKGYAEMIY--NSLGELDLSTLKEFLETIIEQSNHLENLLNELLDFSR---LERKSLQINREKVDLCDLVESAVNAIKEFASSHNVNVLFESNVPCPVEAYIDPTRIRQVLLNLLNNGVKYSKKD-----------------------APDKYVKVILDEKDGGVLIIVEDNGIGIPDHAKDRIFEQFYRVDS-----GLGLAITKEIVELHGGRIWVESEVGKGSRFFVWIPK--------------------------------------------------------------------------------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4JAU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -102983 for 1419 contacts (-72.6/contact) +
2D Compatibility (PS) -23299 + (NN) -9242 + (LL) 44544
1D Compatibility (HY) -14400 + (ID) 3100
Total energy: -108480.0 ( -76.45 by residue)
QMean score : 0.423
|
|
|