Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTRKIILQLLISIVIIFTLASAFVFVVVCINKGKPERKDKLYEIDAAHSSWVQTIAYYLVKPILESALDRYIEKHGLIEYLKEIIQQKVEKGSINFYEIIEGSGSRAFCGQEVVLQMYKISDNLATPLPLPKQTSDVTLVIGQDNQREVGLGVIGMKEGGERVVTINNIANKNEVNFNSYYIKLIEVKDKYPDSVNSMMIFNELINKTGKQVKCGDRVSVKYSLMGHDGEYII----KNQTVQFKVGNKKVPLAMELGVIGMKEGNNRTIISPPELLNVTDDMLIENIDFDEESVSIISLSLDDKQEIAAHHSTVE |
3VAW Chain:A ((101-183)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV-------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VAW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -28967 for 468 contacts (-61.9/contact) +
2D Compatibility (PS) -8465 + (NN) -3203 + (LL) 16464
1D Compatibility (HY) -1600 + (ID) 1200
Total energy: -26971.0 ( -57.63 by residue)
QMean score : 0.413
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