Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKKKNILKAIGIYSFIAMMFVIILYPLLWTFGISLNPGTNLYGAKMIPDNATFKNYAFLLFDDSSQ-----------YLTWYKNTLIVASANALFSVIFVTLTAYAFSRYRFVGRKYGLITFLILQMFPVLMAMVAIYILLNTIGL------LDSLFGLTLVYIGGSIPMNAFLVKGYFDTIPKELDESAKIDGAGHMRIFLQIMLPLAKPILAVVALFNFMGPFMDFILPKILLRSPEKFTLAVGLFNFINDKYANNFTV--FAAGAIMIAVPIAIVFLFLQRYLVSGLTTGATKG |
| 3PUW Chain:G ((27-296)) | -----------------------IMFPLLMVVAISLRQG-NFATGSLIPEQISWDHWKLALGFSVEQADGRITPPPFPVLLWLWNSVKVAGISAIGIVALSTTCAYAFARMRFPGKATLLKGMLIFQMFPAVLSLVALYALFDRLGEYIPFIGLNTHGGVIFAYLGG-IALHVWTIKGYFETIDSSLEEAAALDGATPWQAFRLVLLPLSVPILAVVFILSFIAAITEVPVASLLLRDVNSYTLAVGMQQYLNPQ---NYLWGDFAAAAVMSALPITIVFLLAQRWLVNGLTAGGVKG |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207485 for 1767 contacts (-117.4/contact) +
2D Compatibility (PS) -25665 + (NN) -5932 + (LL) 2864
1D Compatibility (HY) -30400 + (ID) 5100
Total energy: -271718.0 ( -153.77 by residue)
QMean score : 0.311
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