Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVESMLTFMLGPLRQITDFYMEHLLVSNSIVIAGYFATGIFKKKKVVN
2GUK Chain:A ((92-98))
------DFIIGAM-----------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2GUK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 319 for 14 contacts (22.8/contact) +
2D Compatibility (PS) -626 + (NN) 192 + (LL) 4220
1D Compatibility (HY) -1200 + (ID) 100
Total energy: 2805.0 ( 200.36 by residue)
QMean score : -0.577
(partial model without unconserved sides chains):
PDB file :
Tito_2GUK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2GUK-query.scw
PDB file :
Tito_Scwrl_2GUK.pdb
: