Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIRIQDNTIRDGMQQSNVRKSLIIKKEVLK-QINKLNINSVEVGMCTTIEDEF-NIHQFRDILSPEK---ELVVLTRLNEKEIKKIVK---LKIHNLVVKILLPISDLHIKEKLNFSNKYYIQKIKDCLDILKKDKKGVDICFEDAT---RTSREKLKEYMEIISKYQVRTVTFADTVGCSTPLEYGDIFNYFVKKYSNIIFSAHCHNDLGLATANTLAAILNGAKQIETTFLGIGERAGNAPIEEIITILTKKQIESTEFTLPDVYKTSINISKILDFQISENKPIIGENIFKHESGIHQDGTKKNINMYQY-LVPSDLGLKNSQVVQFPISNISSKKILHNKFKSIVNTEEIDENISFYKLVNKFSPEVAPEDTVDLLQIIKRRSKDGNFK |
| 3BLE Chain:A ((20-336)) | -LEILDVTLRDGEQTRGVSFSTSEKLNIAKFLLQKLNVDRVEIASARVSKGELETVQKIMEWAATEQLTERIEILGFVDGNKTVDWIKDSGAKVLNLLTKGSLH----HLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLGERAGNTPLEALVTTIHDKSNSKTNINEIAITEASRLVEVFSGKRISANRPIVGEDVFTQ-------------NLYANPILPERFGRK---------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BLE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -147860 for 2591 contacts (-57.1/contact) +
2D Compatibility (PS) -30907 + (NN) -5476 + (LL) 5320
1D Compatibility (HY) -15600 + (ID) 4200
Total energy: -198723.0 ( -76.70 by residue)
QMean score : 0.521
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