Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKVESIIIGGGPCGLSAAIEQKR--KGIDTLIIEKGNVVESIYNYPTHQTFFSSSDKLSIGDVPFIVEESKPRRNQALVYYREVVKHHQLKVNAFEEVLTVKKMNNKFTITTTKDVYECRF--LTIATGYYGQHNTLEVEGADL---------PKVFHYFKEAHPYFDQDVVIIGGKNSAIDAALELEKAGANVTVLYR----GGDYSPSIKPWILPNFTALVNHEKIDMEFNANVTQITEDTVTYEVNGESKTIHNDYVFAMIGYHPDYEFLKSVGIQINTNEFGTAPMYNKETYETNIENCYIAGVIAAGNDANTIFIENGKFHGGIIAQNMLAKKQTPLES |
| 3CGC Chain:A ((40-320)) | ------VIIGGDAAGMSAAMQIVRNDENANVVTLEKG----EIYSYAQCGLPYVISGAIASTE-KLIARNVKTFRDKYGIDAK--VRHEVTKVDTEKKIVYAEH-------TKTKDVFEFSYDRLLIATGV--RPVMPEWEGRDLQGVHLLKTIPDAERILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGTIYDGDMAEYIYKE----ADKHHIEILTNENVKAFKGNERVEAVETDKGTYKADLVLVSVGVKPNTDFLE--GTNIRTNHKGAIEV--NAYMQTNVQDVYAAGDCA---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -141438 for 2032 contacts (-69.6/contact) +
2D Compatibility (PS) -27866 + (NN) -4268 + (LL) 4408
1D Compatibility (HY) -13200 + (ID) 3850
Total energy: -186214.0 ( -91.64 by residue)
QMean score : 0.340
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