Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNKNVVIKSLATLTILTSVTGIGTTLVEEVQQTAKAENNVTKIQDTNIFPYTGVVAFKSATGFVVGKNTILTNKHVSKNYKV-GDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEGSSIVYSAHTESGNSGSPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAENIDK
2W7S Chain:A ((1-200))
------------------------------------EKNVKEITDATKEPYNSVVAFVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTE----GLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISGTFMEFDAYAQPGNSGSPVLNSKHELIGILYAGS----SEKN-FGVYFTPQLKEFIQNNIEK
General information:
TITO was launched using:
RESULT:
Template:
2W7S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -69307 for 1728 contacts (-40.1/contact) +
2D Compatibility (PS) -21998 + (NN) -12325 + (LL) 3456
1D Compatibility (HY) -16800 + (ID) 4850
Total energy: -121824.0 ( -70.50 by residue)
QMean score : 0.556
(partial model without unconserved sides chains):
PDB file :
Tito_2W7S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2W7S-query.scw
PDB file :
Tito_Scwrl_2W7S.pdb
: