Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNQDRPMKSMSESKCYKNRQVFPQDTNHHHTMFGGTLMANIDEIAAITAMKHAGAQVVTASTDSVDFLKPIKTGDILQYVAMVSYAGTSSMEVVVQIRIDDVFNN--KHDLAALSYLTFVALDDEGKPKHVPGVYPEDDVEKWFYDTAPQRVERRKARRIESKQTIEYLAQVQHIRD
2QQ2 Chain:A ((224-362))
---------------------VGPSDCTLHGFVHGGVTMKLMDEVAGIVAARHCKTNIVTASVDAINFHDKIRKGCVITISGRMTFTSNKSMEIEVLVDADPVV--SQKRYRAASAFFTYVSLSQEGRSLPVPQLVPETEDEKKRFEEGKGRYLQMKAKR------------------
General information:
TITO was launched using:
RESULT:
Template:
2QQ2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -68873 for 954 contacts (-72.2/contact) +
2D Compatibility (PS) -14654 + (NN) -5868 + (LL) 2880
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -95965.0 ( -100.59 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_2QQ2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QQ2-query.scw
PDB file :
Tito_Scwrl_2QQ2.pdb
: