Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQFYLILLAILYLIVSFISIFKMEVVFTRILRIIMGVLLLFVLALTTMSFPKENWWVFIVLLLLVGNVEVTGFKMLKKDLKGVNILNLMSLFIFVIYFILTIVLF
2IAY Chain:A ((61-87))
---------------------------------------------------------------MTVNADLTGFKMTTVTGNGVQRANIFK---------------
General information:
TITO was launched using:
RESULT:
Template:
2IAY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1330 for 97 contacts (13.7/contact) +
2D Compatibility (PS) -2533 + (NN) 3376 + (LL) 10920
1D Compatibility (HY) -400 + (ID) 450
Total energy: 12243.0 ( 126.22 by residue)
QMean score : -0.145
(partial model without unconserved sides chains):
PDB file :
Tito_2IAY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2IAY-query.scw
PDB file :
Tito_Scwrl_2IAY.pdb
: