Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKRLVTGLLALSLFLAACGQDSDQQKDSNKEKDDKAKTEQQDKKTNDSSKDKKDNKDDSKDVNKDNKDNSANDNQQQSNSNATNNDQNQTNNNQSSNNQKSSYVAPYYGQNAAPVARQIYPFNGNKTQALQQLPNFQTALNAANNEANKFGSNNKVYNDYSIEEHNGNYKYVFSFKDPNANGKYSIVTVDYTGQAMVTDPNYQQ |
1UHH Chain:A ((1-35)) | -------------------------------------------------------------------------------------------------------------------------------------------------------ANSKLTSDFDNPRWIGRHKHMFNFLDVNHNGKISL------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UHH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 2201 for 120 contacts (18.3/contact) +
2D Compatibility (PS) -3698 + (NN) -1241 + (LL) 6068
1D Compatibility (HY) -1200 + (ID) 650
Total energy: 1480.0 ( 12.33 by residue)
QMean score : 0.258
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