Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLQRPKIVAELSANHNQDLNLAKESLHAIKESGADFVKLQTY-TPSCMTLDSKEDPFIIQGTLWDKENLYGLYQKASTPLEWHAELFELAKKLDLGIFSSPFSSKALELLESLDCPMYKIASFEIVDLDLIEKAARTQKPIILSSGIATHAELQDAISLCRGVNNFDITLLKCVSAYPSKIEDAHLLSMVKLGETF-GVKFGLSDHTIGSLCPILATTLGASMIEKHFILNKSLQTPDSAFSMDFNGFKSMVGAIKQSVLALGEEEPKINPKTLEERRFFARSLFVIKDIQKGEALTSDNIKALRPNLG-LHPKFYKEILGQKASKFLKANTPLSADDIERAL |
| 4IPJ Chain:A ((20-351)) | --HEPLIICEIGINHEGSLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQ---VIPGNA--DVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTPFSRAAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMNSIESIKKSVEIIREAG-VPYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDAIIGLSDHTLDNYACLGAVALGGSILERHFTDRMDRPGPDIVCSMNPDTFKELKQGAHALKLARGGKKDTIIAGEKPTKDFAFASVVADKDIKKGELLSGDNLWVKKPGNGDFSVNEYETLFGKVAACNIRKGAQIKKTDIE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IPJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158121 for 2622 contacts (-60.3/contact) +
2D Compatibility (PS) -35056 + (NN) -16621 + (LL) 720
1D Compatibility (HY) -14800 + (ID) 5050
Total energy: -228928.0 ( -87.31 by residue)
QMean score : 0.549
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