Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKVVFLLLFMLGGLEAHSDYCSDHCEGTPDSRIPPMGFHFSFVHSV----KYYLQDPQKRDHKLEKCHKAFDSTLKVNFITKSFKKDCKHAQMALEQAQKETP
1VDH Chain:A ((143-172))--------------------------------------CFYPMNKRRQGQDNWYMLPAKERASLMKAHGETGRKYQGEVMQVISGAQGLDDWEWGVDLFSEDPV


General information:
TITO was launched using:
RESULT:

Template: 1VDH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 5954 for 94 contacts (63.3/contact) +
2D Compatibility (PS) -2719 + (NN) 463 + (LL) 1860
1D Compatibility (HY) -1600 + (ID) 100
Total energy: 3858.0 ( 41.04 by residue)
QMean score : 0.136

(partial model without unconserved sides chains):
PDB file : Tito_1VDH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VDH-query.scw
PDB file : Tito_Scwrl_1VDH.pdb: