Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MENHLHADTNTDDKSTKIVRLFGLIGGALIALIIYYALDAQMPHIVEEIPKLSSLNYKAMPVVAGVAVLMGIWWMTEAIDLPATALLPLVLFNVFSVDQFSSVSASYASPIIFLFMGGFILALSMQKWNLHTRIALSIILLVGTSPRRLILGFMIATGFLSMWVSNTATAVMMFPVGMSVLQLVAKLVGKENASNAFYQKEEITKAHGGIMSNIVHKGKDIAQVIQEKTTIYRTNFSICLMLGIAYSASIGSLGTLIGTPPNALLAGYMKTAFNIEIDFAQWMVFGTPLAFIMLILAWLLLT-YVIFPLKIKEI-----PGGKEVVKSELKKLRRLSQAEISVGVIFILASLGWIFLDTILKSWGIKIDKIDSVIAMGVSALLFILPANHQGDRLIDWGVAKKLPWDVLLLFGGGLALSAQFSKTGLSLWIGHLVSGFSHLPILFIIVMVTLMVIFLTEITSNTATAAAFLPVIGGVAMGMGYESHQSLLLTIPVALSATCAFMLPVATPPNAIAYGSGYVKITDMIKAGLWLNLVGVVLISAFSYCLVSLIFN |
| 4RS8 Chain:A ((1-84)) | ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------YIFLTPRAYIIVHLLKVGKAKASEISENT-QIPYQTVIQNIRWLLAEGYVVKEQKGEEIYYKLTDKGKQMATAELEKIRKLVEVV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RS8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49942 for 454 contacts (-110.0/contact) +
2D Compatibility (PS) -8536 + (NN) -6483 + (LL) 39252
1D Compatibility (HY) -1600 + (ID) 950
Total energy: -28259.0 ( -62.24 by residue)
QMean score : 0.274
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