Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLKLHVKAFRFETNKDYNPAYESYFLEYQEDQYLLDLLKQLK---------GVSYNE----NIALKINQIAVFE-DAKVSDLVAFFSKEWVLDPLSKRYALKDLMIDEKEVLKNYEDFFKQVPYITK--------GEKEELEKF---IQI------NFINPQTN--PKYLGDGFFLYVKWLMKRYPT-ERNRLLEMISKPESGVMNFL--SVAHYLYKNDDNIDHEIYELQEMLTNSKIKPWKDFSKNLLSLFQYNSNPPKTPNPPKTCALFNAYAKHLNAQALLKSAKLYLERMGQKVIDLPFCYDGGYYGKIISTHDFLTACAYNLALAKANGVSLIFCEEDSYLNILHAKEVLDNNPEIIDSVNEKLKKYQLVYEKGVEVVYLNEWVNEFLAWELKSPFDAFLGAEFSRIKPSDHFFNKIHLKAPHFLESFQNYAPLLEVNEVSGLLQCAHLRYLGIDLGADFLIVHSLGLFHAFENLSLKASKIYKRDNDNTPTLFLPQIALMAMGEKNKQTLGLDAHYHKVTFI |
| 1KF6 Chain:B ((2-235)) | -EMKNLKIEVVRYNPEVDTAPHSAFYEVPYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLRDY----TDGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPEFIGPAAITLAHRYNEDSRDHGKKERMAQLNS-QNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFLIATLKPR------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -82299 for 1462 contacts (-56.3/contact) +
2D Compatibility (PS) -20483 + (NN) -982 + (LL) 19812
1D Compatibility (HY) -7200 + (ID) 1350
Total energy: -92502.0 ( -63.27 by residue)
QMean score : 0.363
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