Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLIKVSGDKKVIEVSIPLTSISGKARVKIRHAFSDYGISTATRKIPFSLKHYVEWQIGYDVPIKDKEKFELTTLKDEKYHFLGANNKVKTLYELSEMIYYAKRLGLISLENLENTLKFLEKQKQFIEDNFMITRERFRSHQFGGMDFELSRISYPLLIHSFDDNELSEIVIKEQQYGSKTQAMLYFCFSILELKTATPLLNRTAMPKEHALLIIHETNALVFLEMLKIFGLLSQVHHNDVLKILEKILQN |
| 1VFF Chain:A ((108-145)) | ------------------------------------------------------------------------------------------TLHHFTSPLWFMKKGGFLREENLKHWEKYIEKVAELLEKVKLVATFNEPMVYVMMGYLTAYWPPFIRSPFKAFKVAANLLKAHAIAYELLHGKFKVGIVKNIPIILPASDKERDRKAAEKADNLFNWHFLDAIWSGKYRGVFKTYRIPQSDADFIGVNYYT |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VFF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -281 for 175 contacts (-1.6/contact) +
2D Compatibility (PS) -3875 + (NN) -548 + (LL) 6256
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -1798.0 ( -10.27 by residue)
QMean score : 0.192
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