Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADTINTTETTHETKKPNAFVNFFKNNLTDKRYDSLGLIGAGVLCCVLSGAMGIVGIIFVAIGIFLSFSNINLVKLVEKLSKKQPKAATTVNNETQKSQAASVTNEPTEAKETKD
2ZXE Chain:G ((31-41))
-----------------------------------------------------------CVIGIIILLAGK--------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2ZXE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3694 for 33 contacts (-111.9/contact) +
2D Compatibility (PS) -1117 + (NN) 123 + (LL) 6748
1D Compatibility (HY) -2400 + (ID) 150
Total energy: -490.0 ( -14.85 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_2ZXE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZXE-query.scw
PDB file :
Tito_Scwrl_2ZXE.pdb
: