Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFFKFILCLSLGIFAWAKEVIPTPSTPLTPSKRYSINLMTENDGYINPYIDEYYTAG---NQIGFSTKEFDFSKNKAMKWSSYLGFFNKSPRVTRFGISLAQDMYTPSLANRKLVHLHDNHPYGGYLRVNLNVYNRHQTFMELFTISLGTTGQDSLAAQTQRLIHKWGHDPQFYGWNTQLKNEFIFELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNTAFDGGMPYSDKFSIYFFAGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAMMWRSLRVAFTITDISKTFQSQPKHHQIGTLELNFAF |
4V1O Chain:W ((622-669)) | --------------------------PLTEHKSPNLSLMLESPNYCNALIHIKFSAGTEANAVSFDTTFSDFKE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4V1O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4291 for 205 contacts (20.9/contact) +
2D Compatibility (PS) -4805 + (NN) -1919 + (LL) 19104
1D Compatibility (HY) -3600 + (ID) 850
Total energy: 12221.0 ( 59.61 by residue)
QMean score : 0.026
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