Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKKRKRPQSGKIDRVDC---------LEKLGKEN-TTFLSSIAMGSIGQLAIPIP-----GVG-VLIGGFVGGVMSKTFYDVSLTIFKEAKLARQRRIEIEKECRESIRQLEMYQNQFNEVFERYFHGTIKFFNESFDELERALCAGDADLAIAVNNKIQEGMGQELLFDNKQECWEFITSRKEGWNFITSRGKTEI |
| 1JTV Chain:A ((72-154)) | VAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGLPFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTGSPEEVLDRTDIHTFHRFYQYLAHSKQVFREAAQNPEEVAEVFLTALRAPKPTLRYFTTERFLPLLRMRLDDPSGSNYV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JTV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -13895 for 299 contacts (-46.5/contact) +
2D Compatibility (PS) -6946 + (NN) -62 + (LL) 0
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -28153.0 ( -94.16 by residue)
QMean score : 0.060
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