Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MLERYANEEMKALWNEQTKFETYLEVEKAVVRAWNKLGQIQDSDCEKICLKAAFNLERIKEIEKTTKHDLIAFTTCVAESLGEESRFFHYGITSSDCIDTAMALLMTKSLKLIQKGVKNLYETLKNRALEHQDTLMVGRSHGVFGEPITFGLVLALFADEIKRHLKALDLTMEFI--SVGAISGAMGNFAHAPLELEELACGFLGLKTANISNQVIQRDRYARLACDLALLASSCEKIAVNIRHLQRSEVYEVEEAFSAGQKGSSAMPHKRNPILSENITGLCRVIRSFTTPMLENVALWHERDMSHSSVERFALPDLFITSDFMLSRLNSVIENLVVYPKNMLKNLALSGGLVFSQRVLLELPKKGLSREESYSIVQENAMKIWEVLQQGAFKNADENLFLNALLNDERLKKYLNESEIRACFDYSYYTKNVGAIFKRVFG |
1DOF Chain:A ((9-377)) | ---RYGSEEIRRLFTNEAIINAYLEVERALVCALEELGVAERGCCEKVN-KASVSADEV--------HDILSLVLLLEQKSG--CRYVHYGATSNDIIDTAWALLIRRALAAVKEKARAVGDQLASMARKYKTLEMVGRTHGQWAEPITLGFKFANYYYELYIACRQLALAEEFIRAKIGGAVGTMASWGELGLEVRRRVAERLGLPHHVITTQVAPRESFAVLASALALMAAVFERLAVEIRELSRPEI----GEVVEGG---------ANPTASERIVSLARYVRALTHVAFENVALWHERDLTNSANERVWIPEALLALDEILTSALRVLKNVYIDEERITENLQKALPYILTEFHMNRMIKEGASRAEAYKKAKEVKALTFEYQKWPVERLIEDALSLKLC------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DOF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -203232 for 2859 contacts (-71.1/contact) +
2D Compatibility (PS) -37021 + (NN) -13271 + (LL) 5256
1D Compatibility (HY) -24800 + (ID) 6100
Total energy: -279168.0 ( -97.65 by residue)
QMean score : 0.503
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