Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MATKKTKKNKEKKQALENPLKGLYLSLRLKAFITDIFMIYTPMLYIMTYAILGSAKDFRENQSAIFLCLLFYALTHSFFIAFKSQSPGMRYARFKLVKNNGEKVDFFLALWRFVLWVLSMGLLVGFVAPFIFKFFLHDKFSSTHIEIIKEEI |
1PJN Chain:A ((2-12)) | ---KKRKTEEESPLKDKAKKSKG--------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1PJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 805 for 26 contacts (31.0/contact) +
2D Compatibility (PS) -1104 + (NN) -692 + (LL) 11992
1D Compatibility (HY) 0 + (ID) 200
Total energy: 10801.0 ( 415.42 by residue)
QMean score : 0.871
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