Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKISPSPRKLSKVSTSVSFLISFALYAIGFGYFLLREDAPEPLAQAGTTKVTMSLASINTNSNTKTNAESAKPKEEPKEKPKKEEPKKEEPKKETKPKPKPKPKPKPKPKPKPKPEPKPKPEPKVEEPKKEEPKEEPKKEEAKEEAKEKSVPKQVTTKDIVKEKDKQEESNKTSEGATSEAQAYNPGVSNEFLMKIQTAISSKNRYPKMAQIRGIEGEVLVSFTINADGSVTDIKVVKSNTTDILNHAALEAIKSAAHLFPKPDETVHLKIPIAYSLKED |
1QXX Chain:A ((164-228)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PARAQALRIEGQVKVKFDVTPDGRVDNVQILSAKPANMFEREVKNAMRRWRYEPGKPGSGIVVNI--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -11205 for 262 contacts (-42.8/contact) +
2D Compatibility (PS) -6908 + (NN) -922 + (LL) 9940
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -13495.0 ( -51.51 by residue)
QMean score : 0.357
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