Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFIDTHCHLDHKDYENDLDEVLKESLEKGVTQCVIPGADMKDLNRAVGISEKFEGVFFAIGAHPYDVESFDEGLFEKFV---SHQKCVAIGECGLDYYRLPELSERENYKS--KQKEIFTKQIEFSIQHNKPLIIHIREASFDSLNLLKSYPKAF--GVLHCFNA--DSMLLELSDRFYYGI-GGVSTFKNAKRLVEILPKIPKNRLLLETDSPY-----LTPHPFRGTRNSPTYIPLIAQKIAEIIHIETEELASLSTHNAQTLFNFP
4PE8 Chain:A ((1-258))MF-DIGVNLTSSQFAKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPHDSSQWQAATEEAIIELAAQPEVVAIGECGLDFNR--------NFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCFTGTREEMQACVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTPKP-SSRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLFGIA


General information:
TITO was launched using:
RESULT:

Template: 4PE8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -154256 for 2088 contacts (-73.9/contact) +
2D Compatibility (PS) -26276 + (NN) -18091 + (LL) 932
1D Compatibility (HY) -18000 + (ID) 4000
Total energy: -219691.0 ( -105.22 by residue)
QMean score : 0.572

(partial model without unconserved sides chains):
PDB file : Tito_4PE8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PE8-query.scw
PDB file : Tito_Scwrl_4PE8.pdb: