Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKSSIYGLTWTNLTEWLEAHGQKKFRATQVWDWLYRKRVKTFEEMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGLSVCVTTQVGCNIGCTFC---ASGLLKKSRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVVMGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVN--LAISLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEALELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKKNGINCVIRREHGTDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE |
| 3CB8 Chain:A ((23-207)) | ---------------------------------------------------------------------------------------------------------ITFFQGCLMRCLYCHNRDTWDTHGGKEVTVEDLMKEVVTYRHFMNASG-----GGVTASG-GEAILQAEFVRDWFRACKKE------GIHTCLDTNGFVRRYDPVIDELLEVTDLVMLDLKQMNDEIHQNLVGV----SNHRTLEFAKYLANK-NVKVWIRYVVVPGWSDDDDSAHRLGEFTRDMGNVEKIELLPYHELGKH----------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CB8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -97648 for 1331 contacts (-73.4/contact) +
2D Compatibility (PS) -19606 + (NN) -9418 + (LL) 15016
1D Compatibility (HY) -13200 + (ID) 1900
Total energy: -126756.0 ( -95.23 by residue)
QMean score : 0.444
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