Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LHKLSVVIAVYNVSEYIEACLTSVLEQNYKNVELIIVNDGSTDDTFQKVEKLVDGHTNVILIDQENQGV---------SAVRNNGVKAATGDYLGFVDGDDIIAKDMFQKMMDSFEMSDADMVTIGVARLSGDKVYPSTLHERYMVEKKEATTIEETPALLYDTTSWNKVFKKSFWDKHHLEFPEGQMYEDIALMIPAFLYAEKVNIIPDVGYYWRSREGGAKSITQRRNDIAMVNDRLLALKKVNQVLNEKNIQGDLRYQNERKNFEIDLFSMIEWAFLAPKDYYLALQPLIKNYVEQEMKTTALNDIPKEKKRLFKALLANNRPAFLLNSYIYFGKKAVKKITK |
1QGS Chain:A ((2-127)) | --KVSVIMTSYNKSDYVAKSISSILSQTFSDFELFIMDDNSNEETLNVIRPFLNDN-RVRFYQSDISGVKERTEKTRYAALINQAIEMAEGEYITYATDDNIYMPDRLLKMV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1QGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -79066 for 717 contacts (-110.3/contact) +
2D Compatibility (PS) -11155 + (NN) -7642 + (LL) 18228
1D Compatibility (HY) -11200 + (ID) 1450
Total energy: -92285.0 ( -128.71 by residue)
QMean score : 0.570
|
|
|