Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MADISKELIEQLVKQVVLEKMGQSSKHVDPSGILSVKLPVVKVSEEDRLDTGNPSDVVYTKDLVTLEESKRLGFGLMEMKDTTFDWFLDYDEVDYVIEGRLDVVI-DGRTVSAGPGEIIFIPKGSQIKFSVTGEARFIYVTYPADWQS
1O5U Chain:A ((33-98))
-------------------------------------------------------------------------WPIWEKEVSEFDWYYDTNETCYILEGKVEVTTEDGKKYVIEKGDLVTFPKGLRCRWKVLEPVRKHY---------
General information:
TITO was launched using:
RESULT:
Template:
1O5U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29160 for 405 contacts (-72.0/contact) +
2D Compatibility (PS) -7182 + (NN) -1869 + (LL) 5604
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -38357.0 ( -94.71 by residue)
QMean score : 0.427
(partial model without unconserved sides chains):
PDB file :
Tito_1O5U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1O5U-query.scw
PDB file :
Tito_Scwrl_1O5U.pdb
: