Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSKVLNVWAMGDEAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLTAVASKSG-PDVVQMGTTWMPEFVEAGALLDITKDVEKSKNMNSDLFFPGSVKTT-QFDGKTYGVPWYAETRVLFYRTDLLKKVGYNEAPKTWDELSDAALKLSKRGKD----MYGFAIDPNEQTTGFI-----FGRQNGSPLFD-KDG--TPVFNKKPFVDTVTYLDSFIKNG--SAPDTDLGLDASQSFGGDGIVPMFMSG----------PWMVNTLKDTAPDIDGKWATAVLPKKENNES--SLGGANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLKDTNSMPARMDAWEDD-MLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYRGGADVQTQMDTFNDQVETLLKK |
1EU8 Chain:A ((24-407)) | ------------------------------------------------IAEFEKKYPGVT-VELKRQATDTEQRRLDLVNALRGKSSDPDVFLMDVAWLGQFIASGWLEPLDDYVQKD-NYDLSVFFQSVINLADKQGGKLYALPVYIDAGLLYYRKDLLEKYGYSKPPETWQELVEMAQKIQSGERETNPNFWGFVWQ-GKQYEGLVCDFVEYVYSNGGSLGEFKDGKWVPTLNKPENVEALQFMVDLIHKYKISPPNTYTEMTE------EPVRLMFQQGNAAFERNWPYAWGLHNADDSP--VKGKVGVAPLPHFPGHKSAATLGGWHIGISKYSDNKALAWEFVKFVESYSVQKGFAMNLGWNPGRVDVYDDPAVVSKSPHLKELRAVFENAVPRPIVPYYPQLSEIIQKYVNSALAGKISPQEALDKAQKEAEELVKQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EU8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -74456 for 2842 contacts (-26.2/contact) +
2D Compatibility (PS) -37497 + (NN) -13841 + (LL) 2836
1D Compatibility (HY) -25600 + (ID) 5150
Total energy: -153708.0 ( -54.08 by residue)
QMean score : 0.460
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