Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQKVVIIGGGIVGASAAYLLSKENVQ--VTLIDSDEAGQATRAAAGIIC---PWLSKRRNKYWYELAKNSAAFYKELAETLEGDTGRDSGYKQVGVLALRQTEEKLAEL-FNLARERRLDAE-VMGEVAKLSEAETKQRFPLVKSG--FGSVYVSGAARVNGGLFCETLLYAAKENG--VKIKAGRAHFSSDGEVVIDGEKEH----YDKLILATGAWLKDLLQDAGFQTDVLAQKGQ-LLELNFSEFQT--DDWPVILPPSAKSIVPFDNGKIIVG--------------ATHEKAAGFNTEPTAEGKAEILTEVSQFMEGDLASK---VAHVSVGTRPYTPDFTPIIGQLPGFESVFLANGLGASGLTTGPYVGRILADLALGNASDFVLENYEPSKYISR |
| 4P9S Chain:A ((25-406)) | --ETVIIGGGCVGVSLAYHLAKAGMRDVVLLEKSELTAGSTWHAAGLTTYFHPGINLKKIHY------DSIKLY----ERLEEETGQVVGFHQPGSIRLATTPERVDEFKYQMTRTNWHATEQYIIEPEKIHEL-----FPLLNMDKILAGLYNPGDGHIDPYSLTMALATGARKYGALLKYPAPVTSLKPRPDGTWDVETPQGSVRANRIVNAAGFWAREVGKMIGLDHPLIPVQHQYVITSTIPEVKALKRELPVLRDLEGSYYLRQERDGLLFGPYESQEKMKLQASWVAHGVPPGFGKELFESDLDRITEHVEAAMEMVPVLKKADIINIVNGPITYSPDILPMVGPHQGVRNYWVAIGFGY-GIIHAGGVGTYLSDWILHGEPPFDLIELDPNRY--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4P9S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -126599 for 2932 contacts (-43.2/contact) +
2D Compatibility (PS) -37112 + (NN) -9984 + (LL) 2240
1D Compatibility (HY) -20800 + (ID) 4550
Total energy: -196805.0 ( -67.12 by residue)
QMean score : 0.454
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