Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPIIIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAINLDHGHDVAIVKQCLADGFSSVMMDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQE--MYTDPKVAIDFAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHG---------------------GSGCGAENIRESVRLGINKINVGSDFMKAQVNQIKTNLKESP----AVNYVDLIHETIKAGTKAVKYYIHLSGSTGKSL |
| 2FJK Chain:A ((8-305)) | -------ILRKARAEGYGVGAFNTNNMEFTQAILEAAEEMKSPVILALSEG--AMKYGGRALTRMVVALAQEARVPVAVHLDHGSSYESVLKALREGFTSVMIDKSHEDFETNVRETKRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTGADYLAVAIGTSHGAYKGKGRPFIDHPRLARIAKLVPAPLVLHGASAVPQELVERFRAAGGEIGEASGIHPEDIKKAISLGIAKINTDTDLRLAFTALVRETLGKNPKEFDPRKYLGPAREAVK---EVVKSRMELFGSVGRA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -131321 for 2372 contacts (-55.4/contact) +
2D Compatibility (PS) -30027 + (NN) -14032 + (LL) 984
1D Compatibility (HY) -15600 + (ID) 4900
Total energy: -194896.0 ( -82.17 by residue)
QMean score : 0.487
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