Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPEQFQMALAEKGIELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPIE
1JSX Chain:A ((4-206))
----KLSLLLKDAGISLTDHQKNQLIAYVNMLHKWN------------EMLVRHILDSIVVAPYLQGERF---IDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPP----FDGVISRAFASLNDMVSWCHHLPGEQGRFYALKGQMPEDEIALLPEEY-----QVESVVKLQVP--DGERHLVVIKANK-------------------
General information:
TITO was launched using:
RESULT:
Template:
1JSX.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -146630 for 1513 contacts (-96.9/contact) +
2D Compatibility (PS) -20085 + (NN) -5275 + (LL) 1968
1D Compatibility (HY) -19600 + (ID) 3050
Total energy: -192672.0 ( -127.34 by residue)
QMean score : 0.507
(partial model without unconserved sides chains):
PDB file :
Tito_1JSX.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JSX-query.scw
PDB file :
Tito_Scwrl_1JSX.pdb
: