Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVLRKFQVKAFTVLESLIVLSVVAFMTLVFSTSFNNIFRQVEETIFFISFEHLYRDTQKLSAFGQKKQTLTISHNYLENTYERLYLPKTV-KVVKSDTLAFDANGGNSSLAKIQFECYRKTVTYQLYIGSGNYRKKEN
2WKA Chain:A ((68-127))
----------------------------------------------------------------EEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGAR
General information:
TITO was launched using:
RESULT:
Template:
2WKA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -3435 for 243 contacts (-14.1/contact) +
2D Compatibility (PS) -5663 + (NN) 2656 + (LL) 6840
1D Compatibility (HY) -4000 + (ID) 750
Total energy: -4352.0 ( -17.91 by residue)
QMean score : 0.030
(partial model without unconserved sides chains):
PDB file :
Tito_2WKA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WKA-query.scw
PDB file :
Tito_Scwrl_2WKA.pdb
: