Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTSPEERYSSLRRFATEIRLNTLETLNHLGFGHYGGSLSIVETLAILYGDIMDINPEKFKESDRNYMVLSKGHAGPALYSTLYLKGFFDKTFLHSLNTNGTKLPSH--PDRNLTPGIDVTTGSLGQGISIATGIAYAQK-IENSSYYTYTIVGDGELNEGQCWEAIQFAAHHQLHHLIVFVDDNK-KQLDGLTADICNPGDFVAK-FEAFGFDAVRVKGDDIEAIDKAIKTFQDSNSVKPKCIVLDSIKGQGVKELEELASNHHLRPDLQQKTMLERAVISLRESLEVVE |
| 4KXX Chain:A ((9-258)) | ----QQKLQALKDTANRLRISSIQATTAAGSGHPTSCCSAAEIMAVLFFHTMRYKSQDPRNPHNDRFVLSKGHAAPILYAVWAEAGFLAEAELLNLRKISSDLDGHPVPKQAFT---DVATGSLGQGLGAACGMAYTGKYFDKASYRVYCLLGDGELSEGSVWEAMAFASIYKLDNLVAILDINRLGQSD--PAPLQHQMDIYQKRCEAFGWHAIIVDGHSVEELCKAFGQAKH----QPTAIIAKTFKGRGITGVEDKESWHGKPLPKNMAEQIIQEIYSQIQSKKKIL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4KXX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107006 for 2142 contacts (-50.0/contact) +
2D Compatibility (PS) -26726 + (NN) -12107 + (LL) 44
1D Compatibility (HY) -15200 + (ID) 4250
Total energy: -165245.0 ( -77.15 by residue)
QMean score : 0.576
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