Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNINGIKLLSSRAVSKLGDVLYDYGNSTWIASMGGLGQKILGIYQIVELLVSIVLNPFGGALADRFQRRKILLITDAICAIMCFLLSFIGDDKVMVYGLIVANAILAVSNAFSSPAYKSYIPEIVDKADIITYNANLETIVQIISVSSPVLGFLIFNNFGI------RITLIVDAITFLISFLFLYAIKVERVQLSKQEKVAIKNILADIADGFTYIKKEKEIMFFLIIAALLNTFLAMFNYLLPFTNSLLKTSGAYATILSISAIGSIIGALIARKIKSSINSMLSMLVFSSLGVIVMGFPSLFELPIWISYSGSFLFNSLLTMFNIHFFSQV |
| 2VEQ Chain:A ((376-448)) | ----------------------------------------------------------------------------------------------------------------------------------LIYYDTADSLLKVIHYSKVIIS-LIVNNFHAKSEFFNRHPMVMQTITRVVSFISFYQIFV--------ESAAVKQLLVDLTELTANLPTIFGSKLDKLVYLTERLSKLKLLWDKVQLLDSGDSFYHPVFKILQNDIKIIELKNDEMFSLIKGLGSLVPLNSDFRTIVEEFQSEYNISDILS----------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VEQ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -54293 for 362 contacts (-150.0/contact) +
2D Compatibility (PS) -6643 + (NN) -112 + (LL) 13616
1D Compatibility (HY) -9200 + (ID) 1050
Total energy: -57682.0 ( -159.34 by residue)
QMean score : 0.388
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