Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIELLLALLLWNILVFATYAIDKRRAIRGAWRISEKTLLIESLLLGGFGAFLGGEVFRHKTTKWYFRLVWYIGMIIDLAIIWLIWCY
3KTW Chain:A ((24-40))
------------------SYFFS-PTRSKGRRLARIPYKIKTEELVSTLRELGLDPIVIENKKYPRDRKINFLIAVKKVKSKNYTLK
General information:
TITO was launched using:
RESULT:
Template:
3KTW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -963 for 72 contacts (-13.4/contact) +
2D Compatibility (PS) -1568 + (NN) 1505 + (LL) 2792
1D Compatibility (HY) 400 + (ID) 50
Total energy: 2116.0 ( 29.39 by residue)
QMean score : -0.449
(partial model without unconserved sides chains):
PDB file :
Tito_3KTW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KTW-query.scw
PDB file :
Tito_Scwrl_3KTW.pdb
: