Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MYKDDSLTLHTDLYQINMMQVYFNKGIHNKRAVFEAYFRKVPFENGYAVFAGLERIVRYLENLSFSDSDLSYLEELGYPEEFLDYLKNLKMELTVKSAKEGDLVFANE------PLVQIEGPLAQCQLVETAILNIINYQTLVATKAARIRSVIEDEPLLEFGTRRAQEMDAAIWGTRAAIIGGANATSNVRAGKIFNIPVSGTHAHALVQTYGDDYQAFKAYAETHKD---CVFLVDTYDTLRVGVPNAIRVAKEMGEKINFLGVRLDS-----GDLAYLSKKVRQQLDDAGFPNAKIYASNDLDENTILNLKMQKAKIDVWGVGTKLITAYDQPALGAVYKIVSIETDAGSMRDTIKLSNNAEKVSTPGKKQVWRITSRAKGKSEGDYITFADTDVTQLDEIEMFHPTYTYINKTVRDFDAVPLLVDIFDKGKLVYQLPSLQEIQEYGRKEFDQLWDEYKRVLNPQDYPVDLARDVWQNKMDLIDRIRKEALAKGEVR |
| 1YTE Chain:A ((64-304)) | -------------------------------------------------------------------------------DEVLKLLEGLDVDLY--AIPEGTILFPRDANGLPVPFIRVEGRYCDFGMYETAILGFICQASGISTKASKVRLAAGDSPFFSFGIRRMHPAISPMI-DRSAYIGGADGVSGILGAKLIDQDPVGTMPHALSIMLGDE-EAWKLTLENTKNGQKSVLLIDTYMDEKFA---AIKIA-EMFDKVDY--IRLDTPSSRRGNFEALIREVRWELALRGRSDIKIMVSGGLDENTV--KKLREAGAEAFGVGTSISSAKPFDFAMDIVEVNGKPETKRGKMSGRKNVLRCTSCHRIEVVPANVQEKTCICGGSMQNLLVKYLSHGKRTSEYPRPKEIRSRSMKELEYFK----------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1YTE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -114862 for 1751 contacts (-65.6/contact) +
2D Compatibility (PS) -24775 + (NN) -8658 + (LL) 10604
1D Compatibility (HY) -17600 + (ID) 4050
Total energy: -159341.0 ( -91.00 by residue)
QMean score : 0.489
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