Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHHYFLAFFYGSVIIFAICFVIIDSLGVNLVHLYQTSRLWLIEQLIFSIFFLSLAVTILLLLTWFLLDDNSKRQINHNLRRILNNQSINVTDDGTEISTNIQRLSKKMNLMTASLQSKENSRILKSQEIVK-QERKRIARDLHDTVSQDLFAASMVLSGIAQNVSQLDVDQVGSQLLAVEEMLQHAQNDLRILLLHLRPVELENKTLSEGFKMILKELTDKSDIEVVYHESILTLPKKIE---DNIFRIG-QEFISNTLKHSQASRLEVYLNQTENELQLKMIDNGIGFDMDSVYDLSYGLKNIEDRVEDLAGNLQLLSQPDKGVAMDIRLPLVNQNEDKNG |
| 3EHJ Chain:A ((16-214)) | -------------------------------------------------------------------------------------------------------------------------NERIA---ELVKLEERQRMARDLVDTLGQKLSLMGLK-SDLARKLIYKDPEQAARELKSVQQTARTSLNEVRKIVSSMKGIRLKDELIN------IKQILEAADIMFIYEEE--KWPENISLLNENILSMCLKEAVTNVVKHSQAKTCRVDIQQLWKEVVITVSDDGTFKGEENSF---HGLLGMRERLEFANGSLHI--DTENGTKLTMAIPNN-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EHJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52200 for 1295 contacts (-40.3/contact) +
2D Compatibility (PS) -20162 + (NN) -7144 + (LL) 12984
1D Compatibility (HY) -10400 + (ID) 2750
Total energy: -79672.0 ( -61.52 by residue)
QMean score : 0.414
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