Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIKIGLFCAAGFSTGMLVNNMKIAADKEGIEAHIEAYSQGKIADYAKDLDVALLGPQVSYTLDKSKSICDEYGVPIAVIPMADYGMLDGVKVLKLALSLLETRKEA
1E2B Chain:A ((6-93))
---IYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIEAFPETLAGEKGQNADVVLLGPQIAYMLPEIQRLLPNK--PVEVIDSLLYGKVDGLGVLKAAVAAIKKAAAN
General information:
TITO was launched using:
RESULT:
Template:
1E2B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -80234 for 704 contacts (-114.0/contact) +
2D Compatibility (PS) -9192 + (NN) -2642 + (LL) 496
1D Compatibility (HY) -7600 + (ID) 1650
Total energy: -100822.0 ( -143.21 by residue)
QMean score : 0.351
(partial model without unconserved sides chains):
PDB file :
Tito_1E2B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1E2B-query.scw
PDB file :
Tito_Scwrl_1E2B.pdb
: